Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015819541.1_cds_XP_016500097.1_13956
CDS Infomation

[gene=LOC107818572] [db_xref=GeneID:107818572] [protein=cation/H(+) antiporter 20-like] [protein_id=XP_016500097.1] [location=complement(join(81426..81771,82690..82927,83497..84067,86217..86874,88003..88364,89218..89397))] [gbkey=CDS]
Sequence

ATGGGTTTTAACGTATCCTCCATTAAAACATCTTCAGATGGAATATGGCAAGGAGAAAAT
CCTTTGCACTATGCTTTCCCATTGTTAATCATTCAAACCACCTTAGTTGTCTTCCTCAGT
CGCTGCCTTACTTTCCTCCTCAAGCCCCTCCGGCAACCCAAAGTCGTCGCCGAAATCCTT
GCTGGGATAATGCTTGGACCATCAGCTTTTGGTAGGAACGAAGCCTTCGCGCGCTGGATT
TTTCCAATATGGAGCACTCCGATTCTTGAATCTGTAGCAAGCATAGGGCTCTTATTCTTC
TTGTTCCTCGTTGGCCTAGAATTGGACTTGAAAACCATACGTAAAAGTGGAAAAAGAGCT
GCTGGTATAGCATTTGCAGGAATTTCTCTGCCCTTTGTTTTTGGCATTGGAGTTGCTTTT
CTTCTAAGAAAAGTAATCAAAGGGGTTGACAGAGTTGGATATGGAGAATTTTTCTTATTC
ATCGGAGTTTCACTTTCAATCACGGCCTTCCCTGTTCTTGCTCGAATCCTCGCAGAACTA
AGGTTACTTACTACACAAGTAGGTGAAATAGCCATGGCTGCAGCTGCATTCAATGATGTT
GCAGCATGGATCTTACTTGCTCTTGCAGTTGCTCTAGCTGGAGGAGGAAAAGCACATCAT
AGTCCTTTAATCTCCCTCTGGGTTCTTTTATCTGGAATTGGATTTGTGGTTTTTATGTTC
ACAATTGTTAGGCCAATAATGATTTGGATGGCTAGAAAAGCTTCATGTGGTCACCATATT
GTGGAGGAAACTTACATATGTTTAACCCTAGCTGGAGTAATGTTGTTTGGTTTTATGACT
GATCTTATAGGTATACATGCAATATTTGGAGCATTTATATTTGGACTAACTATTCCAAAA
AGTGGAGATTTTGGAGGAAGGTTAATCTTGAGAATTGAAGATTTTGTTTCTGGATTATTA
TTGCCACTTTATTTTGCTTCAAGTGGAATAAAAACTGATATAACCAAAATTCATAGTCTT
GGATCTTGGGGACTTGTTGTGCTTGTTGTGTCCACAGCTTGCGTAGGGAAGGTTTTGGGA
ACATTTTTTGTGGGCATGTTATATAATATACCAGCAAGGGAAGCCTTAGCACTTGGAGTT
TTGATGAATACAAAAGGATTGGTGGAGCTCATCGTTCTTAATATTGGCAAAGAGAAAAAG
GTTTTGGACGATGAGACGTTTGCAATACTGGTGGTTATGGCACTCTTTACAACCTTCATT
ACAACTCCAGCAGTAATGGCTATTCACAAACCATCAATACGCCAAATTCAACTACAAAAA
ACACCAAAACCCAAAGAAAATAATCTCAGAATTCTAGCATGTATTCGTGGCCCTAGAGAT
GCACGTTCACTTATAACCCTCATTGAATCACTAAGATCTAACAAAAATAATAATTCTTCA
ATTACCAAACTTTACGTAATGCAGCTCGTCGAATTCAGCGATCGACTCTCCTCTATCCTG
ATGGTTCAACGTGCCCGAAAGAATGGTTTTCCGTTCATCAGTCGGGTACTCCGGCGAGAC
GACGACACGACCGATCAAGTGACCACGGCGTTCGAGGCGTATAGTCAATTAGGTCGGGTC
AAGGTCCGACCTACAATGGCTATCTCAGCTTTGCCAAATTTGCACGAGGATATTATTCAT
GTTGCGAAGAAGAAACAAGCTGAAATTATTATTTTGCCATTTCATAAATATTGGCAAATG
GAGGGGGGAGAAGAAATGGAGATTCATGCAGGGCATGGATGGAGAACGGTGAATGAGAGG
GTGACGAGACAAGCGCCGTGCGCAGTGGCGGTGCTGGTTGATCGTGGACTAGAAGTGAAT
TCCATGAGAGTTTGCATTGTGTTTTTTGGTGGAGCTGATTGTCGAAAGGCTATGGAATTT
GGTAGCAGAATGGTTGAACATCCAGCTGTTAGGGTTACATTAGTAAGATTCATCCAACAT
ATTGGGAGTAATTTTGATGAAGCTGAAAGGACTTTGGACGATACTACTATTGCAGATTTC
AAGATGAGGTGGGATAAACAAACTGTATATGCTGAAAAAGAAGCAAGTGATGAATTGGTG
GAACAAGTATTGGCAATAGGGAAAAGTGGGGAATTTGAGCTGATAATAGTAGGAAAAGGC
ATGTTCCCACAATACATAATGGCAAAACTGTCTGAGAACCCATTAACTGATCAGCATTCA
GAATTGGGGCCAATGGCTAATCTATTGGCTTCCTCTGGCAAAGAGATAAAAAGCTCTGTC
CTAATGATTCAACAACAAGCTTTTGGCTGTGAAAATAGTAAGGATATGAACTCAAAAGTG
GCTAGCCAATGTTAA

Peptide Sequence

PEP ID

XP_016500097.1
PEP Infomation

PREDICTED: cation/H(+) antiporter 20-like [Nicotiana tabacum]
Sequence

MGFNVSSIKTSSDGIWQGENPLHYAFPLLIIQTTLVVFLSRCLTFLLKPLRQPKVVAEIL
AGIMLGPSAFGRNEAFARWIFPIWSTPILESVASIGLLFFLFLVGLELDLKTIRKSGKRA
AGIAFAGISLPFVFGIGVAFLLRKVIKGVDRVGYGEFFLFIGVSLSITAFPVLARILAEL
RLLTTQVGEIAMAAAAFNDVAAWILLALAVALAGGGKAHHSPLISLWVLLSGIGFVVFMF
TIVRPIMIWMARKASCGHHIVEETYICLTLAGVMLFGFMTDLIGIHAIFGAFIFGLTIPK
SGDFGGRLILRIEDFVSGLLLPLYFASSGIKTDITKIHSLGSWGLVVLVVSTACVGKVLG
TFFVGMLYNIPAREALALGVLMNTKGLVELIVLNIGKEKKVLDDETFAILVVMALFTTFI
TTPAVMAIHKPSIRQIQLQKTPKPKENNLRILACIRGPRDARSLITLIESLRSNKNNNSS
ITKLYVMQLVEFSDRLSSILMVQRARKNGFPFISRVLRRDDDTTDQVTTAFEAYSQLGRV
KVRPTMAISALPNLHEDIIHVAKKKQAEIIILPFHKYWQMEGGEEMEIHAGHGWRTVNER
VTRQAPCAVAVLVDRGLEVNSMRVCIVFFGGADCRKAMEFGSRMVEHPAVRVTLVRFIQH
IGSNFDEAERTLDDTTIADFKMRWDKQTVYAEKEASDELVEQVLAIGKSGEFELIIVGKG
MFPQYIMAKLSENPLTDQHSELGPMANLLASSGKEIKSSVLMIQQQAFGCENSKDMNSKV
ASQC

Transcript Sequence

Gene sequence data has not been registered.